NeuroTopology Group

Mathematics • Topology • Neuroscience • Computation

Developing mathematical foundations for understanding biological structure across scales.

We combine mathematics, topology and computation to understand how the structure of cells gives rise to complex biological organization, from individual neurons to networks.

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Reconstructed neuronal morphology

The People Behind NeuroTopology

Meet the researchers developing mathematical and computational foundations of the NeuroTopology Group.

Lida Kanari

Lida Kanari

Group Leader

Nestor Timonidis

Nestor Timonidis

Postdoctoral researcher

Coming soon

Coming soon

Doctoral student

Featured Projects

Selected projects illustrating the research directions of NeuroTopology.

Topological representation of branching tree structures
Mathematical Foundations

Topology of Trees

Developing the mathematical framework for representing trees, branching structures and their topological properties.

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Reconstructed human neurons connecting in the cortex.
Data-Centric Computation

Learning Biological Structure

Topological and machine learning methods for comparing, classifying and clustering complex cellular morphologies.

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A computationally generated brain at single cell resolution.
From Cells to Systems

From Neurons to Networks

Understanding how single cell morphology constrains connectivity and contributes to brain-network organization.

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Interactive Exploration

Explore the work of the NeuroTopology group through interactive scientific games and experimentation with the tools we develop.

Neuronal morphology for the Real Neuron Challenge

Coming soon!

Real Neuron Challenge

Can you distinguish real neuronal morphologies from computationally generated ones?

Progressive generation of a branching neuronal morphology

Coming soon!

Synthesize Your Own Neuron

Explore how mathematical and biological constraints generate realistic neuronal morphologies.

Latest News

Recent highlights from the NeuroTopology Group.

2026

New members joining NeuroTopology

We welcome one postdoctoral and two new doctoral researchers to the group.

2026

Presenting at Erlangen AI hub conference

Flash talk from Lida Kanari about neuron and network complexity.

2026

New Publication

Temporal Topology Provides an Interpretable Framework for Neuronal Morphogenesis.

2026

Lida Kanari appointed Associate Editor of Brain Informatics

Joining the editorial board of the Springer Nature journal Brain Informatics.

2026

Lida Kanari joins the Young Academy of Europe

Joining a European network of outstanding early-career researchers across disciplines.

Opportunities

Join the Group

We welcome enquiries from researchers and students interested in mathematics, topology, computational neuroscience and neuronal morphology.

Opportunities for doctoral research, postdoctoral projects and student research projects will be advertised here as they become available.

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